Transduction:Article Title: Functional screening reveals genetic dependencies and diverging cell cycle control in atypical teratoid rhabdoid tumors
Article Snippet: .. Primary antibodies used in this study for DigiWest were the following: β-actin (Sigma, A1978, AMBRA1 (Cell Signaling, 24907), ATM (Cell Signaling, 2873), ATR (Cell Signaling, 2790), AURKA (Cell Signaling, 4718), AURKB (Cell Signaling, 3094), BUB1B (Cell Signaling, 5421), Caspase3 (Cell Signaling, 9662), CDK1 (Cell Signaling, 9112), CDK1-pTyr15 (Cell Signaling, 4539), CDC25A (abm, Y021163), CDC25A-pSer75 (abm, Y011138), CDC25B (R&D, AF1649), CDC27 (Transduction Laboratories, C40920), CDK2 (Cell Signaling, 2546), CDK2-pThr160 (Cell Signaling, 2561), CDK3 (abcam, ab135805), CDK4 (Cell Signaling, 2906), CDK4-pThr172 (Invitrogen, PA-64482), CDK5 (Cell Signaling, 2506), CDK6 (Cell Signaling, 13331), CDK6-pTyr13 (biorbyt, orb15013), CDK6-pTyr24 (biorbyt, orb15014), CHK2 (Cell Signaling, 3440), CHK2-pThr68 (Cell Signaling, 2661), c-MYC (Cell Signaling, 9402), c-MYC-pThr58 (ThermoFisher, PA5-37654), c-MYC-pThr62/Ser62 (abcam, ab32029), cyclin A (abcam, ab53054), cyclin B1 (abcam, ab32053), cyclin D1 (Cell Signaling, 2926), cyclin D1-pThr286 (ThermoFisher, PA5-37487), cyclin D2 (Cell Signaling, 3741), cyclin D3 (Cell Signaling, 2936), cyclin E1 (Cell Signaling, 4129), cyclin E2 (Cell Signaling, 4132), E2F-2 (Millipore, DR1095), E2F-4 (biorbyt, orb10571), histone H3-pSer28 (Millipore, 07–145), hisotne H3-pSer10 (Cell Signaling, 9701), MCM2 (Cell Signaling, 3619), MCM2-pSer139 (Cell Signaling, 8861), MDM2 (Santa Cruz, sc-965), MDM2-pSer166 (Cell Signaling, 3521), p16 (ProteinTech Group, 10883-1-AP), p21 (Cell Signaling, 2947), p27 (Cell Signaling, 3698), p53 (Santa Cruz, sc-126), p53-pSer37 (Cell Signaling, 9289), p53-pSer15 (Cell Signaling, 9284), RB (Cell Signaling, 9313), RB-pSer807/Ser811 (Cell Signaling, 8516), RB-pSer780 (Cell Signaling, 3590), RB-pSer608 (Cell Signaling, 8147), RB-pSer795 (Cell Signaling, 9301), RBPSUH (Cell Signaling, 5313), RPA2 p34 (Millipore, 04–1481), Survivin (Cell Signaling, 2802), TOPK (Cell Signaling, 4942), and TOPO 2 alpha (Santa Cruz, sc-13058). .. In order to overexpress either 3xFLAG tag alone or 3xFLAG-AMBRA1 in ATRT cells, we first generated lentiviral plasmids N174-MCS (Puro) (Addgene #81068) carrying either 3xFLAG or 3xFLAG-AMBRA1.
Article Title: Functional screening reveals genetic dependencies and diverging cell cycle control in atypical teratoid rhabdoid tumors.
Article Snippet: .. Primary antibodies used in this study for DigiWest were the following: β-actin (Sigma, A1978, AMBRA1 (Cell Signaling, 24907), ATM (Cell Signaling, 2873), ATR (Cell Signaling, 2790), AURKA (Cell Signaling, 4718), AURKB (Cell Signaling, 3094), BUB1B (Cell Signaling, 5421), Caspase3 (Cell Signaling, 9662), CDK1 (Cell Signaling, 9112), CDK1-pTyr15 (Cell Signaling, 4539), CDC25A (abm, Y021163), CDC25A-pSer75 (abm, Y011138), CDC25B (R&D, AF1649), CDC27 (Transduction Laboratories, C40920), CDK2 (Cell Signaling, 2546), CDK2-pThr160 (Cell Signaling, 2561), CDK3 (abcam, ab135805), CDK4 (Cell Signaling, 2906), CDK4-pThr172 (Invitrogen, PA-64482), CDK5 (Cell Signaling, 2506), CDK6 (Cell Signaling, 13331), CDK6-pTyr13 (biorbyt, orb15013), CDK6-pTyr24 (biorbyt, orb15014), CHK2 (Cell Signaling, 3440), CHK2-pThr68 (Cell Signaling, 2661), c-MYC (Cell Signaling, 9402), c-MYC-pThr58 (ThermoFisher, PA5-37654), c-MYC-pThr62/Ser62 (abcam, ab32029), cyclin A (abcam, ab53054), cyclin B1 (abcam, ab32053), cyclin D1 (Cell Signaling, 2926), cyclin D1-pThr286 (ThermoFisher, PA5-37487), cyclin D2 (Cell Signaling, 3741), cyclin D3 (Cell Signaling, 2936), cyclin E1 (Cell Signaling, 4129), cyclin E2 (Cell Signaling, 4132), E2F-2 (Millipore, DR1095), E2F-4 (biorbyt, orb10571), histone H3-pSer28 (Millipore, 07–145), hisotne H3-pSer10 (Cell Signaling, 9701), MCM2 (Cell Signaling, 3619), MCM2-pSer139 (Cell Signaling, 8861), MDM2 (Santa Cruz, sc-965), MDM2-pSer166 (Cell Signaling, 3521), p16 (ProteinTech Group, 10883-1-AP), p21 (Cell Signaling, 2947), p27 (Cell Signaling, 3698), p53 (Santa Cruz, sc-126), p53-pSer37 (Cell Signaling, 9289), p53-pSer15 (Cell Signaling, 9284), RB (Cell Signaling, 9313), RB-pSer807/Ser811 (Cell Signaling, 8516), RB-pSer780 (Cell Signaling, 3590), RB-pSer608 (Cell Signaling, 8147), RB-pSer795 (Cell Signaling, 9301), RBPSUH (Cell Signaling, 5313), RPA2 p34 (Millipore, 04–1481), Survivin (Cell Signaling, 2802), TOPK (Cell Signaling, 4942), and TOPO 2 alpha (Santa Cruz, sc-13058). .. In order to overexpress either 3xFLAG tag alone or 3xFLAG-AMBRA1 in ATRT cells, we first generated lentiviral plasmids N174-MCS (Puro) (Addgene #81068) carrying either 3xFLAG or 3xFLAG-AMBRA1.
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